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  5. Pir_g39233

Pir_g39233


Description : not classified & original description: none


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39233
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Aob_g01469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38568.t1 Aspi01Gene38568 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59961.t1 Aspi01Gene59961 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g203950 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g12934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g33600.1 LOC_Os04g33600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g05600.1 LOC_Os12g05600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g00720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g13910.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g19330 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g12398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012183 No alias not classified & original description: CDS=1236-2741 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0259.g026863 No alias not classified & original description: CDS=1-954 0.03 OrthoFinder output from all 47 species
Sam_g12562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo170810 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g074340.3.1 Solyc06g074340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 74 325
No external refs found!