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  5. Pir_g38975

Pir_g38975 (ATNTH1)


Aliases : ATNTH1

Description : bifunctional glycosylase-lyase and endonuclease *(NTH) & original description: none


Gene families : OG0003391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38975
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Mp5g20840.1 ATNTH1 bifunctional glycosylase-lyase and endonuclease (NTH) 0.03 OrthoFinder output from all 47 species
Ore_g34210 ATNTH1 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 156 297
IPR000445 HhH_motif 222 250
No external refs found!