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Aliases : PAT1
Description : GRAS-type transcription factor & original description: none
Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00186p00018500 | SCL1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G17230 | SCL13 | SCARECROW-like 13 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023908 | SCL5 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04153 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05274 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g26689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36559.t1 | PAT1, Aspi01Gene36559 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene38043.t1 | PAT1, Aspi01Gene38043 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48189.t1 | PAT1, Aspi01Gene48189 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g039020 | PAT1 | GRAS-type transcription factor & original description: CDS=1-2502 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22814 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G109900.1 | PAT1, Ceric.01G109900 | GRAS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05689 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12997 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03424 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40278 | SCL5 | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g36170.2 | PAT1, LOC_Os07g36170 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g39470.1 | PAT1, LOC_Os07g39470 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17559 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28608 | PAT1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06251 | PAT1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10124 | PAT1 | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g19162 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07387 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15312 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23112 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14260 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010646_P001 | PAT1, Zm00001e010646 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | HCCA |
| CC | GO:0005666 | RNA polymerase III complex | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 331 | 697 |
| No external refs found! |