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  5. Pir_g34251

Pir_g34251


Description : SIM-type cyclin-dependent kinase inhibitor & original description: none


Gene families : OG0000566 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g34251
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Aob_g06307 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G012500.1 Ceric.18G012500 SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Dac_g39100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13018 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g60760.1 LOC_Os03g60760 SIM-type cyclin-dependent kinase inhibitor 0.02 OrthoFinder output from all 47 species
MA_10433795g0010 No alias SIM-type cyclin-dependent kinase inhibitor 0.04 OrthoFinder output from all 47 species
Ore_g01602 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.02 OrthoFinder output from all 47 species
Pir_g05869 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g27639 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025732 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Tin_g14425 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030686 90S preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!