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  5. Pir_g31996

Pir_g31996


Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g31996
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 HTB1 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.02 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31074 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17135.t1 HTB4, Aspi01Gene17135 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58527.t1 HTB4, Aspi01Gene58527 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Cre01.g062172 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Ehy_g14460 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26408 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436516g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Msp_g42770 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11623 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g31913 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.03 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 124
No external refs found!