1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g31820

Pir_g31820


Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: none


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g31820
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Als_g46232 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aop_g00185 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Azfi_s2045.g108868 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.114 No alias Vesicle trafficking.endomembrane... 0.01 OrthoFinder output from all 47 species
Ehy_g27342 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
LOC_Os01g22870.1 LOC_Os01g22870 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
Ore_g20464 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Pp3c26_11230V3.1 Pp3c26_11230 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g57350 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Spa_g11569 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 1 100
No external refs found!