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  5. Pir_g29190

Pir_g29190 (MYBR1, MYB44, ATMYB44, ATMYBR1)


Aliases : MYBR1, MYB44, ATMYB44, ATMYBR1

Description : MYB class-R2R3 subgroup-22/23 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g29190
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 OrthoFinder output from all 47 species
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001042.7 MYB1, AtMYB1 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dde_g28841 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01010006001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01019967001 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_24073 MYB77 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g51110.1 BW52, ATMYB52,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g10130.1 BW52, ATMYB52,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_120049g0010 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_120049g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09350.1 AtMYB98, MYB98 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g35103 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e017363_P001 AtMYB117, LOF1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e018391_P001 MYB54, ATMYB54,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!