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  5. Pir_g27416

Pir_g27416 (ECA3, ATECA3)


Aliases : ECA3, ATECA3

Description : not classified & original description: none


Gene families : OG0000409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g27416
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000128.12 ATECA1, ACA3, ECA1 Calcium-transporting ATPase, endoplasmic reticulum-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000857.15 ECA3, ATECA3 Cation-transporting ATPase CA1 OS=Dunaliella bioculata 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000980.16 ECA4, ATECA4 Calcium-transporting ATPase 4, endoplasmic... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001496.2 ECA3, ATECA3 Calcium-transporting ATPase 10, plasma membrane-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001496.3 ECA2, ATECA2 Calcium-transporting ATPase, endoplasmic reticulum-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.14 ECA3, ATECA3 Solute transport.primary active transport.P-type ATPase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 51 117
No external refs found!