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  5. Pir_g27174

Pir_g27174 (ATARFB1B, ARFB1B)


Aliases : ATARFB1B, ARFB1B

Description : ARF-GTPase *(ARFA) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g27174

Target Alias Description ECC score Gene Family Method Actions
Cba_g49446 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.21 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Len_g05534 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g11170.1 ATARFA1B, ARFA1B ARF-GTPase 0.02 OrthoFinder output from all 47 species
Mp7g13050.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Msp_g41323 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01985 No alias ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo232066 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Spa_g24132 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49717 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51715 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 46 215
No external refs found!