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  5. Pir_g26516

Pir_g26516 (SKOR)


Aliases : SKOR

Description : voltage-gated potassium cation channel *(AKT/SKOR/GORK) & original description: none


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g26516
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT4G32650 AtLKT1, KC1, KAT3, ATKC1 potassium channel in Arabidopsis thaliana 3 0.02 OrthoFinder output from all 47 species
Als_g31893 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Als_g63128 ATAKT1, AKT1, KT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04472 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Cba_g24391 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.04 OrthoFinder output from all 47 species
Dde_g23664 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.04 OrthoFinder output from all 47 species
GSVIVT01035748001 AtLKT1, KC1, KAT3, ATKC1 Solute transport.channels.VIC superfamily.voltage-gated... 0.05 OrthoFinder output from all 47 species
Gb_34207 AKT3, AKT2/3, AKT2, KT2/3 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species
LOC_Os01g52070.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species
LOC_Os04g36740.1 SKOR, LOC_Os04g36740 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.05 OrthoFinder output from all 47 species
LOC_Os06g14310.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species
MA_1915g0010 No alias Probable potassium channel AKT5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_896264g0010 AKT3, AKT2/3, AKT2, KT2/3 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Mp5g22750.1 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Pnu_g00836 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Solyc01g010080.3.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Spa_g39913 SKOR not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32450 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Zm00001e030915_P001 SKOR, Zm00001e030915 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.05 OrthoFinder output from all 47 species
Zm00001e032909_P001 ATAKT1, AKT1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 533 623
IPR021789 KHA_dom 778 846
IPR000595 cNMP-bd_dom 402 487
IPR002110 Ankyrin_rpt 643 695
IPR005821 Ion_trans_dom 63 307
No external refs found!