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  5. Pir_g26479

Pir_g26479


Description : not classified & original description: none


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g26479

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010800001 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014456001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01020365001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g01840.1 LOC_Os07g01840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 76 465
IPR007658 DUF594 691 740
No external refs found!