Description : histone *(H3) & original description: none
Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G10980 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Ala_g12785 | No alias | histone H3 variant *(CENH3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g36382 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g33085 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000970.26 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
Dac_g04344 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026582001 | No alias | Histone H3.2 OS=Pisum sativum | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g60005 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0017.g007202 | No alias | not classified & original description: CDS=224-661 | 0.03 | OrthoFinder output from all 47 species | |
Spa_g33705 | No alias | histone *(H3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g52114 | No alias | histone *(H3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g56118 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008160_P001 | Zm00001e008160 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016861_P001 | Zm00001e016861 | histone (H3) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000270 | peptidoglycan metabolic process | IEP | HCCA |
MF | GO:0003796 | lysozyme activity | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009253 | peptidoglycan catabolic process | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0061783 | peptidoglycan muralytic activity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
No external refs found! |