Pir_g25431 (UBP16)

Aliases : UBP16

Description : deubiquitinase *(UBP15-21) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g25431
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Adi_g023978	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g069165	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12069	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07912	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_05817	UBP18	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Gb_28125	UBP25	deubiquitinase (UBP25)	0.03	OrthoFinder output from all 47 species
LOC_Os09g28940.1	UBP17, LOC_Os09g28940	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Ore_g27850	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01115	UBP23	deubiquiTinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004560	alpha-L-fucosidase activity	IEP	HCCA
MF	GO:0004668	protein-arginine deiminase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009445	putrescine metabolic process	IEP	HCCA
BP	GO:0009446	putrescine biosynthetic process	IEP	HCCA
MF	GO:0015928	fucosidase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	553	855
IPR002893	Znf_MYND	87	124

External Links

No external refs found!

Pir_g25431 (UBP16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation