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  5. Pir_g24957

Pir_g24957 (MIZ1)


Aliases : MIZ1

Description : not classified & original description: none


Gene families : OG0000577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000577_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24957

Target Alias Description ECC score Gene Family Method Actions
AMTR_s05059p00005030 evm_27.TU.AmTr_v1... Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G76610 No alias Protein of unknown function, DUF617 0.03 OrthoFinder output from all 47 species
AT2G22460 No alias Protein of unknown function, DUF617 0.03 OrthoFinder output from all 47 species
AT2G41660 MIZ1 Protein of unknown function, DUF617 0.02 OrthoFinder output from all 47 species
AT3G25640 No alias Protein of unknown function, DUF617 0.03 OrthoFinder output from all 47 species
AT5G06990 No alias Protein of unknown function, DUF617 0.03 OrthoFinder output from all 47 species
Adi_g044873 MIZ1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060373 MIZ1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10082 MIZ1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G048300.1 Ceric.39G048300 not classified & original description: pacid=50582520... 0.04 OrthoFinder output from all 47 species
Dcu_g20033 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008216001 No alias Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01033254001 MIZ1 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30976 No alias Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59690.1 LOC_Os03g59690 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g30030.1 LOC_Os06g30030 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_106058g0010 No alias Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g38656 MIZ1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g069300.1.1 Solyc06g069300 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g080060.1.1 MIZ1, Solyc10g080060 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g52637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011793_P001 Zm00001e011793 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013182_P001 Zm00001e013182 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023348_P001 Zm00001e023348 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010274 hydrotropism IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006460 MIZ1-like_pln 111 279
No external refs found!