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  5. Pir_g24554

Pir_g24554 (CML23)


Aliases : CML23

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24554

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 OrthoFinder output from all 47 species
Ore_g04785 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28931 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 90 152
IPR002048 EF_hand_dom 20 80
No external refs found!