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  5. Pir_g23249

Pir_g23249 (MEE60)


Aliases : MEE60

Description : not classified & original description: none


Gene families : OG0001007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g23249

Target Alias Description ECC score Gene Family Method Actions
Als_g50895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g082960.3.1 Solyc06g082960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009364_P001 MEE60, Zm00001e009364 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!