Pir_g22302


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00185p00034770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Cba_g09549 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g48292 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_26085 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g14892 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!