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  5. Pir_g22278

Pir_g22278


Description : not classified & original description: none


Gene families : OG0001915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g22278
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00140570 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00063p00175250 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g15353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_08370 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_2272g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g065220.3.1 Solyc07g065220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g065230.1.1 Solyc07g065230 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g11157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038807_P001 Zm00001e038807 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 54 151
No external refs found!