Pir_g22217 (ATHB3, HB-3, ATHB-3, HAT7)

Aliases : ATHB3, HB-3, ATHB-3, HAT7

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g22217
Cluster	HCCA: Cluster_254

Target	Alias	Description	ECC score	Gene Family Method
AT4G40060	ATHB16, HB16, ATHB-16	homeobox protein 16	0.03	OrthoFinder output from all 47 species
AT5G15150	ATHB3, HB-3, ATHB-3, HAT7	homeobox 3	0.03	OrthoFinder output from all 47 species
Aev_g25617	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Ala_g31747	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene42458.t1	ATHB21, HB21,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene58187.t1	Aspi01Gene58187	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Dcu_g04639	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01008065001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
LOC_Os03g07450.1	ATHB13, LOC_Os03g07450	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os09g29460.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g08275	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Lfl_g02863	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g02749	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Solyc04g005800.3.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc08g083130.4.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Spa_g11388	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g18476	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009770_P001	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e010004_P002	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e022379_P002	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	185	235
IPR003106	Leu_zip_homeo	237	278

External Links

No external refs found!

Pir_g22217 (ATHB3, HB-3, ATHB-3, HAT7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation