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Description : cohesin cofactor *(PDS5) & original description: none
Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00192140 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00213120 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G77600 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022401 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06245 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G037000.1 | Ceric.11G037000 | cohesin cofactor *(PDS5) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29223 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10056 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02974 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023587001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035890001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02487 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g17840.1 | LOC_Os06g17840 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21968 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g09667 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434304g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g13850.1 | No alias | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25546 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18971 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04827 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22700 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g57308 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59813 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14013 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18046 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35729 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015094_P002 | Zm00001e015094 | cohesin cofactor (PDS5) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e022962_P003 | Zm00001e022962 | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030989_P001 | Zm00001e030989 | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |