Pir_g20440


Description : not classified & original description: none


Gene families : OG0006391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006391_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20440

Target Alias Description ECC score Gene Family Method Actions
AT4G24090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Ala_g25345 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g09255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g28428 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g15706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019640001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g35990.1 LOC_Os09g35990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_24252g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g18574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012199 No alias not classified & original description: CDS=892-1812 0.03 OrthoFinder output from all 47 species
Spa_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!