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  5. Pir_g20323

Pir_g20323


Description : not classified & original description: none


Gene families : OG0001954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20323
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Ala_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04731 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g20567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432173g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432173g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_72553g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g08635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36774 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e025003_P001 Zm00001e025003 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037409_P001 Zm00001e037409 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!