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  5. Pir_g20017

Pir_g20017


Description : regulatory protein *(SOQ1) of non-photochemical quenching & original description: none


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20017
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.12 OrthoFinder output from all 47 species
Adi_g021878 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Aev_g14013 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.1 OrthoFinder output from all 47 species
Als_g62032 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Aspi01Gene46305.t1 Aspi01Gene46305 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46306.t1 Aspi01Gene46306 regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Azfi_s0061.g034958 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Cba_g31907 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ceric.02G025300.1 Ceric.02G025300 regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Ceric.06G023000.1 Ceric.06G023000 regulatory protein *(SOQ1) of non-photochemical... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.10 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Cre13.g586050 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g46221 No alias regulatory protein *(SOQ1) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Dde_g18494 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
GSVIVT01031253001 No alias Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.08 OrthoFinder output from all 47 species
LOC_Os03g19760.1 LOC_Os03g19760 SOQ1 non-photochemical quenching regulator protein 0.15 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.13 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.1 OrthoFinder output from all 47 species
MA_129620g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.06 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.13 OrthoFinder output from all 47 species
Nbi_g39429 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
Pnu_g14012 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Ppi_g08248 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Sam_g50621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Smo79954 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.08 OrthoFinder output from all 47 species
Spa_g16040 No alias regulatory protein *(SOQ1) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Tin_g46320 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Zm00001e001473_P001 Zm00001e001473 SOQ1 non-photochemical quenching regulator protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 86 269
IPR012336 Thioredoxin-like_fold 441 535
IPR001258 NHL_repeat 644 669
No external refs found!