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  5. Pir_g19965

Pir_g19965


Description : SSU processome assembly factor *(UTP2/NOP14) & original description: none


Gene families : OG0006351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19965

Target Alias Description ECC score Gene Family Method Actions
Adi_g012810 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.02 OrthoFinder output from all 47 species
Ala_g20715 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Aob_g17400 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.04 OrthoFinder output from all 47 species
Aop_g09330 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.04 OrthoFinder output from all 47 species
Cre06.g260850 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dac_g21133 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03088 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.04 OrthoFinder output from all 47 species
Len_g19715 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.04 OrthoFinder output from all 47 species
Mp8g07460.1 No alias SSU processome assembly factor (UTP2/NOP14) 0.03 OrthoFinder output from all 47 species
Ore_g32784 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007276 Nop14 57 923
No external refs found!