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Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g09630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16997 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04252 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23959 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007681 | No alias | not classified & original description: CDS=1-3132 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011259 | No alias | not classified & original description: CDS=1-2301 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023783 | No alias | not classified & original description: CDS=1-2922 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030882 | CRR22 | not classified & original description: CDS=1-1611 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038619 | No alias | not classified & original description: CDS=1-4530 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045915 | CRR22 | not classified & original description: CDS=197-1879 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057202 | No alias | not classified & original description: CDS=1-2553 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0373.g067166 | No alias | not classified & original description: CDS=1-2166 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072918 | No alias | not classified & original description: CDS=1-3447 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0619.g079560 | EMB2758 | not classified & original description: CDS=1-2046 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03367 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G059200.1 | Ceric.14G059200 | not classified & original description: pacid=50634117... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g13383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g26245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04638 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15472 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0117.g021137 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=1-933 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo76175 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g009790.4.1 | Solyc09g009790 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12958 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g13649 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16966 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28830 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g30446 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g38826 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 428 | 476 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 227 | 273 |
| IPR002885 | Pentatricopeptide_repeat | 126 | 174 |
| IPR002885 | Pentatricopeptide_repeat | 24 | 73 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 324 |
| No external refs found! |