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  5. Pir_g19409

Pir_g19409


Description : component *(MED17) of head module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0007634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19409

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00160620 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Aop_g20936 No alias component *(MED17) of head module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033759 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ceric.37G020600.1 Ceric.37G020600 component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Dac_g17925 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ore_g19097 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Sam_g10024 No alias component *(MED17) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Tin_g20753 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!