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Aliases : VPS60.1
Description : associated protein of ESCRT-III complex *(VPS60) & original description: none
Gene families : OG0002554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g10454 | VPS60.1 | associated protein of ESCRT-III complex *(VPS60) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g10455 | VPS60.1 | associated protein of ESCRT-III complex *(VPS60) &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g006500.2.1 | VPS60.1, Solyc11g006500 | VPS60 associated protein of ESCRT-III complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 13 | 207 |
| No external refs found! |