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  5. Pir_g19037

Pir_g19037 (TOM1, ATTOM1)


Aliases : TOM1, ATTOM1

Description : tobamovirus multiplication replication host factor *(TOM1) & original description: none


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19037

Target Alias Description ECC score Gene Family Method Actions
Adi_g024423 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.04 OrthoFinder output from all 47 species
Aop_g00424 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Dcu_g06952 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Msp_g01947 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Nbi_g02803 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.04 OrthoFinder output from all 47 species
Nbi_g11299 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Zm00001e011584_P001 TOM1, ATTOM1,... TOM1 tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 54 324
No external refs found!