Pir_g18645


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18645

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Adi_g001198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010269 No alias not classified & original description: CDS=1215-6422 0.01 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.07 OrthoFinder output from all 47 species
Ceric.19G070400.1 Ceric.19G070400 not classified & original description: pacid=50576012... 0.04 OrthoFinder output from all 47 species
Cre08.g386000 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
Gb_10246 No alias PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005170.3.1 Solyc03g005170 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g21891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 1077 1127
IPR019787 Znf_PHD-finger 1154 1195
IPR008395 Agenet-like_dom 19 92
No external refs found!