Aliases : ESP3, EMB2733
Description : RNA helicase *(Prp2) & original description: none
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G26370 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G18465 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
Aev_g14240 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02597 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g08262 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Als_g01190 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01897 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13922 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.15G036900.1 | Ceric.15G036900 | RNA helicase *(Prp22) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G064800.1 | ESP3, EMB2733,... | RNA helicase *(Prp2) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021589.28 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
Cre08.g358563 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g30923 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g13368 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g22478 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g09280.1 | LOC_Os06g09280 | RNA helicase (Prp22) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g23530.1 | LOC_Os06g23530 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g20554.1 | LOC_Os11g20554 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05720 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10434449g0010 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.01 | OrthoFinder output from all 47 species | |
MA_5383g0010 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
MA_8723931g0010 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Mp2g13680.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g02780.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g03460.1 | EMB3011 | RNA helicase (Prp16) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07572 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g17219 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g00856 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g09947 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05341 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g17516 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16290 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29503 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g48742 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g015040.4.1 | Solyc05g015040 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g076910.2.1 | EMB3011, Solyc10g076910 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25913 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e010450_P001 | EMB3011, Zm00001e010450 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014112_P001 | Zm00001e014112 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016478_P002 | Zm00001e016478 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038305_P001 | Zm00001e038305 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
CC | GO:0048500 | signal recognition particle | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |