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Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g54309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35709.t2 | Aspi01Gene35709 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G038400.1 | Ceric.16G038400 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36714 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00863 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23473 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06129 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43163 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02210 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013028 | No alias | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28681 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51243 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g52771 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 416 | 462 |
| No external refs found! |