Pir_g16966


Description : not classified & original description: none


Gene families : OG0002724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16966

Target Alias Description ECC score Gene Family Method Actions
AT5G62270 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
Aev_g34188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72445.t1 CRK8, Aspi01Gene72445 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G063300.1 Ceric.13G063300 not classified & original description: pacid=50635576... 0.01 OrthoFinder output from all 47 species
Dde_g29843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_109877g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8367012g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g26561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g010570.4.1 Solyc01g010570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g14616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019545_P002 Zm00001e019545 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037960_P002 Zm00001e037960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!