Pir_g16723 (ATCLASP, CLASP)


Aliases : ATCLASP, CLASP

Description : microtubule orientation regulator *(CLASP) & original description: none


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16723

Target Alias Description ECC score Gene Family Method Actions
Aev_g21161 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02715 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Gb_32969 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42840.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
MA_33941g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g01070.1 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Nbi_g05012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g05351 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g008040.3.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.02 OrthoFinder output from all 47 species
Spa_g26122 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007629_P001 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.05 OrthoFinder output from all 47 species
Zm00001e041199_P003 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 828 1013
IPR024395 CLASP_N_dom 291 503
No external refs found!