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  5. Pir_g16682

Pir_g16682 (ARAD1)


Aliases : ARAD1

Description : 1,5-alpha-arabinosyltransferase *(ARAD) & original description: none


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16682

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00076450 evm_27.TU.AmTr_v1... Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g10392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28946.t1 ARAD1, Aspi01Gene28946 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g02380.1 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g021410.1.1 Solyc07g021410 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g062600.3.1 Solyc08g062600 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g08251 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e020864_P001 Zm00001e020864 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 65 368
No external refs found!