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  5. Pir_g16274

Pir_g16274


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16274

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.06 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.04 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.03 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g483500 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.03 OrthoFinder output from all 47 species
Smo440026 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g09459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 3533 3684
IPR009543 VPS13_VAB 3434 3592
IPR009291 Vps62 2022 2185
IPR009291 Vps62 2262 2408
IPR026854 VPS13-like_N 2 115
IPR031646 VPS13_extend_chorein 141 386
IPR010482 Peroxin 2940 3052
IPR031642 VPS13_mid_RBG 584 821
No external refs found!