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  5. Pir_g15694

Pir_g15694


Description : not classified & original description: none


Gene families : OG0002474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15694

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00221510 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Azfi_s0185.g056599 No alias not classified & original description: CDS=261-1451 0.04 OrthoFinder output from all 47 species
Nbi_g01916 No alias component *(TRM9) of TRM9-TRM112 tRNA... 0.03 OrthoFinder output from all 47 species
Sam_g39159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027450 AlkB-like 168 339
No external refs found!