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  5. Pir_g15545

Pir_g15545 (AtSPL9, SPL9)


Aliases : AtSPL9, SPL9

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15545

Target Alias Description ECC score Gene Family Method Actions
Adi_g013176 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085801 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112854 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08296 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03958 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23300 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 114 187
IPR004333 SBP_dom 324 397
No external refs found!