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  5. Pir_g15532

Pir_g15532 (GT-1)


Aliases : GT-1

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0003320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15532

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00209070 GT-1,... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Als_g63266 GT-1 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16538 GT-1 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g17420.1 GT-1 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0249.g026736 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g26978 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 41 124
No external refs found!