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  5. Pir_g15377

Pir_g15377


Description : component *(CWC21) of MAC spliceosome-associated complex & original description: none


Gene families : OG0003203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15377

Target Alias Description ECC score Gene Family Method Actions
Aev_g12192 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Ala_g18481 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Als_g03832 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Als_g28501 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Aop_g06645 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Aspi01Gene56052.t2 Aspi01Gene56052 component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015475 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Cba_g27324 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ceric.33G033500.1 Ceric.33G033500 component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001071.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.107 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g46607 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ehy_g04929 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ehy_g10000 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01001478001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g32499 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Mp1g28520.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ppi_g10244 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Solyc09g092250.3.1 Solyc09g092250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g41651 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 286 346
IPR017868 Filamin/ABP280_repeat-like 75 175
No external refs found!