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Aliases : VAC1, ECB2, ATECB2
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g02274 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06708 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07076 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18763 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19221 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55255 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27300 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29464 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049164 | No alias | not classified & original description: CDS=1-2763 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060258 | No alias | not classified & original description: CDS=1-1893 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065805 | No alias | not classified & original description: CDS=1-2679 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0469.g072874 | CRR22 | not classified & original description: CDS=1-1206 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1399.g102577 | No alias | not classified & original description: CDS=1-951 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67208 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G083700.1 | Ceric.29G083700 | not classified & original description: pacid=50625623... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G043200.1 | Ceric.37G043200 | not classified & original description: pacid=50616612... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24117 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07441 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g33060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14439 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45899 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g17001 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60441 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63884 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02334 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13365 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000390 | No alias | not classified & original description: CDS=1-1221 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007300 | No alias | not classified & original description: CDS=1-4008 | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g18900 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g34089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 117 | 140 |
| IPR002885 | Pentatricopeptide_repeat | 318 | 341 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 542 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 462 |
| IPR002885 | Pentatricopeptide_repeat | 545 | 573 |
| IPR002885 | Pentatricopeptide_repeat | 285 | 306 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 643 | 691 |
| No external refs found! |