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  5. Pir_g14943

Pir_g14943 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14943
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233520 CLC-A, ATCLC-A,... Chloride channel protein CLC-a OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00013p00233550 ATCLC-B, CLC-B,... Solute transport.carrier-mediated transport.CLC anion... 0.04 OrthoFinder output from all 47 species
AT3G27170 ATCLC-B, CLC-B chloride channel B 0.03 OrthoFinder output from all 47 species
AT5G40890 CLC-A, ATCLC-A,... chloride channel A 0.04 OrthoFinder output from all 47 species
Aspi01Gene39432.t1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.37 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
GSVIVT01033108001 ATCLC-B, CLC-B Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Gb_03967 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
LOC_Os04g55210.1 LOC_Os04g55210 anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
LOC_Os12g25200.1 ATCLC-B, CLC-B,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Ore_g09753 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ore_g12404 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Smo442632 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Zm00001e040930_P001 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 717 765
IPR000644 CBS_dom 613 671
IPR001807 Cl-channel_volt-gated 163 580
No external refs found!