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  5. Pir_g14505

Pir_g14505


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14505

Target Alias Description ECC score Gene Family Method Actions
AT2G03110 No alias RNA binding;nucleic acid binding 0.05 OrthoFinder output from all 47 species
Adi_g019265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.03 OrthoFinder output from all 47 species
Nbi_g36442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00630 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Pnu_g30289 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Pnu_g32788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g010840.2.1 Solyc11g010840 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 72 123
IPR004088 KH_dom_type_1 324 373
IPR004088 KH_dom_type_1 187 255
IPR004088 KH_dom_type_1 411 478
No external refs found!