1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g13559

Pir_g13559


Description : not classified & original description: none


Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13559
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT5G11240 No alias transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Als_g47262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000123.23 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g538500 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g02302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g46060.1 LOC_Os01g46060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g18840.1 LOC_Os03g18840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g43830.1 LOC_Os12g43830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g00060.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g17083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo404454 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g116380.4.1 Solyc03g116380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e001372_P001 Zm00001e001372 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 494 596
No external refs found!