1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g13051

Pir_g13051


Description : not classified & original description: none


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13051

Target Alias Description ECC score Gene Family Method Actions
Als_g15883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13790 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000993 No alias not classified & original description: CDS=119-3475 0.04 OrthoFinder output from all 47 species
Cba_g13501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G002000.1 Ceric.15G002000 not classified & original description: pacid=50640344... 0.03 OrthoFinder output from all 47 species
Ceric.17G084700.1 Ceric.17G084700 not classified & original description: pacid=50618199... 0.04 OrthoFinder output from all 47 species
Dac_g10625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22749 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 458 478
IPR002885 Pentatricopeptide_repeat 690 713
IPR002885 Pentatricopeptide_repeat 589 617
IPR002885 Pentatricopeptide_repeat 485 513
IPR032867 DYW_dom 1092 1171
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 783 830
IPR002885 Pentatricopeptide_repeat 382 430
No external refs found!