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  5. Pir_g13002

Pir_g13002


Description : not classified & original description: none


Gene families : OG0006168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13002
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00238130 At-RS31a, RS31a,... No description available 0.03 OrthoFinder output from all 47 species
Ala_g15149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023541 No alias not classified & original description: CDS=1-2034 0.05 OrthoFinder output from all 47 species
Ceric.07G047500.1 Ceric.07G047500 not classified & original description: pacid=50626922... 0.03 OrthoFinder output from all 47 species
Dcu_g20463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39610 At-SR34, SRP34,... not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 4 61
No external refs found!