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  5. Pir_g12972

Pir_g12972


Description : not classified & original description: none


Gene families : OG0001892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12972

Target Alias Description ECC score Gene Family Method Actions
AT3G50030 No alias ARM-repeat/Tetratricopeptide repeat (TPR)-like protein 0.02 OrthoFinder output from all 47 species
Als_g16138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25462.t1 Aspi01Gene25462 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36848.t1 Aspi01Gene36848 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60265.t1 Aspi01Gene60265 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0868.g090466 No alias not classified & original description: CDS=249-2462 0.03 OrthoFinder output from all 47 species
Ceric.01G033500.1 Ceric.01G033500 not classified & original description: pacid=50591325... 0.04 OrthoFinder output from all 47 species
Len_g22878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000721_P001 Zm00001e000721 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!