1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g12916

Pir_g12916 (AtATG18a)


Aliases : AtATG18a

Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12916

Target Alias Description ECC score Gene Family Method Actions
AT2G40810 ATG18C, ATATG18C homolog of yeast autophagy 18C 0.03 OrthoFinder output from all 47 species
Aop_g06158 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Cba_g26260 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Cre10.g425750 AtATG18a Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.01 OrthoFinder output from all 47 species
Dde_g24434 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g17320 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ppi_g11987 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Sam_g14713 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!