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  5. Pir_g12877

Pir_g12877


Description : hexose transporter *(VGT) & original description: none


Gene families : OG0001268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12877
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT5G17010 No alias Major facilitator superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g28575 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47665 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04305 No alias hexose transporter *(VGT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03841.t1 Aspi01Gene03841 hexose transporter *(VGT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0177.g056135 No alias hexose transporter *(VGT) & original description: CDS=141-1610 0.03 OrthoFinder output from all 47 species
Cba_g19847 No alias hexose transporter *(VGT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10688 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13156 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49968 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04595 No alias hexose transporter *(VGT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 37 483
No external refs found!