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  5. Pir_g12858

Pir_g12858


Description : not classified & original description: none


Gene families : OG0000927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12858

Target Alias Description ECC score Gene Family Method Actions
Als_g01714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019320001 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50860.1 LOC_Os04g50860 UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g05706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098000.3.1 Solyc03g098000 UV-B-induced protein At3g17800, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g28943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041557_P002 Zm00001e041557 UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 137 263
No external refs found!