Pir_g12537 (APUM24, PUM24)


Aliases : APUM24, PUM24

Description : rRNA processing factor involved in ITS2 rRNA removal *(APUM24) & original description: none


Gene families : OG0004290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004290_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12537

Target Alias Description ECC score Gene Family Method Actions
Ala_g22344 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.05 OrthoFinder output from all 47 species
Als_g33028 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Cre12.g528950 APUM24, PUM24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g01831 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Pnu_g06860 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Sam_g40242 No alias rRNA processing factor involved in ITS2 rRNA removal... 0.04 OrthoFinder output from all 47 species
Tin_g01125 APUM24, PUM24 rRNA processing factor involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 149 171
IPR001313 Pumilio_RNA-bd_rpt 174 207
IPR012959 CPL_dom 409 567
No external refs found!